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Merck
senior scientist genai/ml protein design
Posted Salary:NA
Market Salary:$80k - $150k/yr
Market salary is Jobtrees’ estimate of the expected pay range for this job type and location. Users can expect the actual pay for the posted job may not fall within the estimated range.
cambridge, MA, 02238
Posted
3 days ago

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Job Description

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Job Description
Our Company's Discovery Biologics Disruptive Technologies group is seeking an exceptional generative AI protein engineer to drive the advancement and application of structure-based de novo design and optimization methods to support our biotherapeutic portfolio. In addition to planning and executing experiments to improve and evaluate technical capabilities, the individual is expected to partner closely with cross-functional discovery programs to turn great ideas into valuable medicines that help patients. The role is based out of our Cambridge, MA facility.
We are on a quest for cures and are committed to be the world's premier, most research-intensive biopharmaceutical company. Our teams combine leading drug discovery capabilities and world-class R&D with the purpose of turning breakthrough science into life-changing medicines.
We recognize that the diversity in our team is our strength and are committed to creating an inclusive environment for all employees. Successful candidates must demonstrate inclusive behaviors in working with a diverse group of scientists to drive our core mission.
In this role, a successful candidate will partner with computational and wet lab researchers to design experiments, identify and develop technologies, and create impactful medicines.
Key Responsibilities
- Apply generative AI and machine learning-based protein design and engineering technologies to invent novel biologic therapeutics; including de novo design and structure-based optimization.
- Foster a high-performance culture of collaboration, engagement, self-accountability and inclusion.
- Effectively partner across multidisciplinary interfaces to achieve organizational objectives.
- Actively develop talent, strategically maximizing diversity to strengthen the team.
- Support external partnerships and collaboration opportunities.
- Stay abreast of external advancements in the relevant scientific fields.
- Promote the external reputation of our group.
Qualifications & Experience
- PhD in Biochemistry, Computational Biology, Protein Engineering, Physics, or related field and minimum of 0-3 years of industry experience, or an MS and a minimum of 4 years industry experience, or B.S. and a minimum of 7 years industry experience.
- Demonstrated success in applying GenAI/ML-based protein design methods.
- Proven industry track record of success working with cross-functional teams.
- Commitment to scientific excellence and rigor.
- Excellent communication and collaboration skills.
- Champion for diverse and inclusive culture.
- Strong external reputation with high-impact publications, presentations, and scientific community engagement.
- Passion for sharing knowledge and helping colleagues develop.
Required skills:
- Experience applying generative AI methods for protein design and engineering, including de novo design and lead optimization.
- Deep understanding of protein structure and molecular biophysics.
- Mastery of protein structural modeling and design tools (e.g. AlphaFold, Rosetta, RFDiffusion, ProteinMPNN, or similar)
- Strong skills in data analysis and visualization and making data-driven decisions.
- Comprehensive scientific knowledge across workflows and domains integral to the discovery of protein therapeutics
Preferred skills
- Experience evaluating and combining generative AI models and applying machine-learning-based methods to solve complex problems in biologics discovery and development.
- Project leadership experience in discovery of protein therapeutics or technology development.
- Experience in managing external collaborations.
- Hands-on experience with NGS data.
- Experience deploying scalable computational workflows.
#EligibleforERP
As an Equal Employment Opportunity Employer, we provide equal opportunities to all employees and applicants for employment and prohibit discrimination on the basis of race, color, age, religion, sex, sexual orientation, gender identity, national origin, protected veteran status, disability status, or other applicable legally protected characteristics. As a federal contractor, we comply with all affirmative action requirements for protected veterans and individuals with disabilities. For more information about personal rights under the U.S. Equal Opportunity Employment laws, visit:
EEOC Know Your Rights
EEOC GINA Supplement?
We are proud to be a company that embraces the value of bringing together, talented, and committed people with diverse experiences, perspectives, skills and backgrounds. The fastest way to breakthrough innovation is when people with diverse ideas, broad experiences, backgrounds, and skills come together in an inclusive environment. We encourage our colleagues to respectfully challenge one another's thinking and approach problems collectively.
Learn more about your rights, including under California, Colorado and other US State Acts (https://urldefense.com/v3/\https:/www.msdprivacy.com/us/en/CCPA-notice/\;!!DuJIhUBmA6S-!CgtKRhjWVCipNvp-c1-eOdkBke5VAYrFu\nO9xLpgYVUG7B9RK2-jLDMORIX8RP5gTenY6eWKbGwCnces0j8YBDCEJ3Y\AM$)
Current Employees apply HERE (https://wd5.myworkday.com/msd/d/task/1422$6687.htmld)
Current Contingent Workers apply HERE (https://wd5.myworkday.com/msd/d/task/1422$4020.htmld)
US and Puerto Rico Residents Only:
Our company is committed to inclusion, ensuring that candidates can engage in a hiring process that exhibits their true capabilities. Please click here (https://survey.sogosurvey.com/r/aCdfqL) if you need an accommodation during the application or hiring process.
As an Equal Employment Opportunity Employer, we provide equal opportunities to all employees and applicants for employment and prohibit discrimination on the basis of race, color, age, religion, sex, sexual orientation, gender identity, national origin, protected veteran status, disability status, or other applicable legally protected characteristics. As a federal contractor, we comply with all affirmative action requirements for protected veterans and individuals with disabilities. For more information about personal rights under the U.S. Equal Opportunity Employment laws, visit:
EEOC Know Your Rights (https://www.eeoc.gov/sites/default/files/2022-10/22-088\EEOC\KnowYourRights\10\20.pdf)
EEOC GINA Supplement?
We are proud to be a company that embraces the value of bringing together, talented, and committed people with diverse experiences, perspectives, skills and backgrounds. The fastest way to breakthrough innovation is when people with diverse ideas, broad experiences, backgrounds, and skills come together in an inclusive environment. We encourage our colleagues to respectfully challenge one another's thinking and approach problems collectively.
Learn more about your rights, including under California, Colorado and other US State Acts (https://www.msdprivacy.com/us/en/CCPA-notice/)
U.S. Hybrid Work Model
Effective September 5, 2023, employees in office-based positions in the U.S. will be working a Hybrid work consisting of three total days on-site per week, Monday - Thursday, although the specific days may vary by site or organization, with Friday designated as a remote-working day, unless business critical tasks require an on-site presence.This Hybrid work model does not apply to, and daily in-person attendance is required for, field-based positions; facility-based, manufacturing-based, or research-based positions where the work to be performed is located at a Company site; positions covered by a collective-bargaining agreement (unless the agreement provides for hybrid work); or any other position for which the Company has determined the job requirements cannot be reasonably met working remotely. Please note, this Hybrid work model guidance also does not apply to roles that have been designated as "remote".
San Francisco Residents Only: We will consider qualified applicants with arrest and conviction records for employment in compliance with the San Francisco Fair Chance Ordinance
Los Angeles Residents Only: We will consider for employment all qualified applicants, including those with criminal histories, in a manner consistent with the requirements of applicable state and local laws, including the City of Los Angeles' Fair Chance Initiative for Hiring Ordinance
Search Firm Representatives Please Read Carefully
Merck & Co., Inc., Rahway, NJ, USA, also known as Merck Sharp & Dohme LLC, Rahway, NJ, USA, does not accept unsolicited assistance from search firms for employment opportunities. All CVs / resumes submitted by search firms to any employee at our company without a valid written search agreement in place for this position will be deemed the sole property of our company. No fee will be paid in the event a candidate is hired by our company as a result of an agency referral where no pre-existing agreement is in place. Where agency agreements are in place, introductions are position specific. Please, no phone calls or emails.
Employee Status:
Regular
Relocation:
Domestic
VISA Sponsorship:
Yes
Travel Requirements:
No Travel Required
Flexible Work Arrangements:
Not Applicable
Shift:
Not Indicated
Valid Driving License:
No
Hazardous Material(s):
n/a
Required Skills:
Data Engineering, Design Applications, Information Security, Machine Learning, Software Development, Software Development Life Cycle (SDLC), System Designs, Systems Integration, Testing
Preferred Skills:
Job Posting End Date:
04/11/2025
*A job posting is effective until 11:59:59PM on the day BEFORE the listed job posting end date. Please ensure you apply to a job posting no later than the day BEFORE the job posting end date.
Requisition ID: R340801
Employment Type
Full-time

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